Research Computing Facility

Peter Mac Informatics Consulting Training

This is an initiative led by the Research Computing Facility at the Peter MacCallum Cancer Centre to empower researchers and students with the data science tools and skills needed to analyse their own data.

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Current workshop materials

Browse current training materials automatically generated from the public repositories in the PMacDaSci GitHub Organisation.

Repository AI_Beyond_Omics_Workshop

AI Beyond Omics Workshop

Workshop materials from the PMacDaSci GitHub organisation.

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Repository nextflow-intro-workshop

Introduction to Nextflow

Workshop materials from the PMacDaSci GitHub organisation.

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Workshop site IntroPython-pandas

Introduction to Python and pandas

This workshop is designed to give beginners a solid foundation in Python programming for data analysis and visualization, with a specific focus on applications in cancer biology

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Workshop site IntroPython-Bio

Introduction to Python for Biological Data

This workshop is designed to give beginners a solid foundation in Python programming for data analysis and visualization, with a specific focus on applications in cancer biology

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Workshop site IntroR

Introduction to R

This workshop is designed to provide beginners with foundational understanding of R programming language. Through a combination of theoretical explanations, hands-on coding exercises, and practical applications, participants will learn how to leverage R for data analysis, manipulation and visualization cancer biology datasets.

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Repository survival-analysis-intro

Introduction to Survival Analysis

Workshop materials from the PMacDaSci GitHub organisation.

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Workshop site python-intro

Python Intro

Materials for the Peter Mac "Introduction to Solving Biological Problems with Python" 4 week course

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Workshop site r-intermediate

R Intermediate

An intermediate level course on the R statistical programming language http://tinyurl.com/cruk-tidyr

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Workshop site docker-intro

Reproducible Computational Environments using Containers

Workshop Materials for Reproducible Computational Environments using Containers

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Workshop site shell-novice

Unix Shell / Bash

Workshop materials for the Unix shell (Bash) as a practical tool for working with files, automating repetitive tasks, and building reproducible workflows.

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Workshop site REDCap_R

Working with REDCap Data in R

This workshop is designed for beginners with little to no programming experience who want to learn how to work with REDCap data using R.

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Other and historical materials

Additional repositories from previous workshops and related training activities.

Repository galaxy-intro-2019-05-06

Galaxy Intro 2019 05 06

Workshop materials from the PMacDaSci GitHub organisation.

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Repository pmacplot

Pmacplot

R package that helps create and export ggplot2 charts in the style used by the BBC News data team

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Repository RNAseq-R

Rnaseq R

RNAseq analysis in R workshop, originally taught: http://combine-australia.github.io/2016-05-11-RNAseq/

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Scheduled workshops

Upcoming sessions are listed on the Peter Mac Connect page.

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